Dr. Dawei Yan

Publications:

1. Yan D., Nambara E. (2023) Conserved and unique functions of NIN-like proteins in nitrate sensing and signaling. Plant Science 336, 111842.
2. Nguyen CH, Yan D., Nambara E. (2023) Persistence of Abscisic Acid Analogs in Plants: Chemical Control of Plant Growth and Physiology. Genes 14 (5), 1078.
3. Diddi N, Lai L, Nguyen CH, Yan D., Nambara E, Abrams S. (2023). An efficient and scalable synthesis of a persistent abscisic acid analog (+)-tetralone ABA. Organic & Biomolecular Chemistry 21 (14): 3014-3019.
4. Jiang Zhu, Wen-Shu Wang, Yan D., Li-Wei Hong, Ting-Ting Li, Xiang Gao, Yun-Huang Yang, Feng Ren, Y.T. Lu, T.T. Yuan. (2023). CK2 promotes jasmonic acid signaling response by phosphorylating MYC2 in Arabidopsis, Nucleic Acids Research. 51(2): 619–630.
5. Yan D., Tajima H., Cline L.C., Fong R.Y., Ottaviani J.I., Shapiro H., and Blumwald E. (2022). Genetic modification of flavone biosynthesis in rice enhances biofilm formation of soil diazotrophic bacteria and biological nitrogen fixation. Plant Biotechnol. J. 20: 2135-2148.
6. Nambara E, Yan D., Wen J et al (2022) Plant Hormones: Gene Family Organization and Homeolog Interactions of Genes for Gibberellin Metabolism and Signaling in Allotetraploid Brassica napus. Plant Omics: Advances in Big Data Biology.151-171.
7. Zorraquino V., Toubiana D., Yan D., and Blumwald E. (2018). Draft genome sequence of the nitrogen-fixing endophyte Azoarcus communis SWub3. Microbiol. Resour. Announc. 7: e01080-18.
8. Duermeyer L., Khodapanahi E., Yan D., Krapp A., Rothstein S.J., and Nambara E. (2018). Regulation of seed dormancy and germination by nitrate. Seed Sci. Res. 28: 150–157.
9. Phua S.Y., Yan D., Chan K.X., Estavillo G.M., Nambara E., and Pogson B.J. (2018). The arabidopsis SAL1-PAP pathway: A case study for integrating chloroplast retrograde, light and hormonal signaling in modulating plant growth and development? Front. Plant Sci. 9.
10. Topham A.T., Taylor R.E., Yan  D., Nambara  E., Johnston I.G., and Bassel G.W. (2017). Temperature variability is integrated by a spatially embedded decision-making center to break dormancy in Arabidopsis seeds. Proc. Natl. Acad. Sci. U. S. A. 114: 6629–6634.
11. Yan D. et al. (2016). NIN-like protein 8 is a master regulator of nitrate-promoted seed germination in Arabidopsis. Nature Communications 7. 13179.
12. Yan D. Tatematsu K., Nakabayashi K., Endo A., Okamoto M., and Nambara E. (2015). A Comparison of Transcriptomes Between Germinating Seeds and Growing Axillary Buds of Arabidopsis. In Advances in Plant Dormancy (Springer, Cham), 223–233.
13. Yan D., Duermeyer L., Leoveanu C., and Nambara E. (2014). The functions of the endosperm during seed germination. Plant Cell Physiol. 55.(9): 1521-1533.
14. Hong L.-W., Yan D., Liu W.-C., Chen H.-G., and Lu Y.T. (2014). TIME FOR COFFEE controls root meristem size by changes in auxin accumulation in Arabidopsis. J. Exp. Bot. 65: 275–286.
15. Wang J., Yan D., Yuan T.T., Gao X., and Lu Y.T. (2013). A gain-of-function mutation in IAA8 alters Arabidopsis floral organ development by change of jasmonic acid level. Plant Mol. Biol. 82: 71–83.
16. Yan D., Wang J., Yuan T.T., Hong L.-W., Gao X., and Lu Y.T. (2013). Perturbation of auxin homeostasis by overexpression of wild-type IAA15 results in impaired stem cell differentiation and gravitropism in roots. PLoS One 8: e58103.
17. HU Y., Liu S., YUAN H., Li J., Yan D., ZHANG J., and Lu Y.T. (2010). Functional comparison of catalase genes in the elimination of photorespiratory H2O2 using promoter‐and 3′‐untranslated region exchange experiments in the Arabidopsis cat2 photorespiratory mutant. Plant. Cell Environ. 33: 1656–1670.
18. ZHANG J., YUAN L., Shao Y, Du W., Yan D., and Lu Y.T. (2008). The disturbance of small RNA pathways enhanced abscisic acid response and multiple stress responses in Arabidopsis. Plant. Cell Environ. 31: 562–574.
19. Lu Y.Z., Yan D., and Lu Y.T. (2005). Identification of microRNAs from rice. Funct. plant Biol. 32: 963–971.